1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g078410.2.1

Solyc10g078410.2.1 (Solyc10g078410)


Aliases : Solyc10g078410

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0002752 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002752_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g078410.2.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT2G41170 No alias F-box family protein 0.1 OrthoFinder output from all 47 species
Aev_g22715 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g03617 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.05 OrthoFinder output from all 47 species
Gb_15831 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g59180.1 LOC_Os01g59180 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
MA_72913g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Ppi_g16688 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Smo88058 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 77 121
No external refs found!