Aliases : CIP111, Solyc10g078320
Description : Calmodulin-interacting protein 111 OS=Arabidopsis thaliana (sp|q9let7|ci111_arath : 896.0)
Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc10g078320.2.1 | |
Cluster | HCCA: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00040p00198390 | CIP111,... | Calmodulin-interacting protein 111 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT3G56690 | CIP111 | Cam interacting protein 111 | 0.05 | OrthoFinder output from all 47 species | |
Adi_g054679 | emb1354, CDC48C | platform ATPase CDC48 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g33031 | No alias | platform ATPase CDC48 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene45727.t1 | CIP111, Aspi01Gene45727 | platform ATPase CDC48 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000525.10 | emb1354, CDC48C | Cell division control protein 48 homolog C... | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g398550 | emb1354, CDC48C | Cell division control protein 48 homolog C... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g04096 | CIP111 | platform ATPase CDC48 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g26861 | No alias | platform ATPase CDC48 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010343001 | emb1354, CDC48C | Cell division control protein 48 homolog C... | 0.03 | OrthoFinder output from all 47 species | |
Gb_01408 | CIP111 | Calmodulin-interacting protein 111 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g01980.1 | emb1354, CDC48C,... | Cell division control protein 48 homolog C... | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os11g11340.1 | CIP111, LOC_Os11g11340 | Calmodulin-interacting protein 111 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
MA_179420g0010 | emb1354, CDC48C | Cell division control protein 48 homolog C... | 0.03 | OrthoFinder output from all 47 species | |
Mp2g13350.1 | CIP111 | Calmodulin-interacting protein 111 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Mp3g20500.1 | CDC48B | Cell division control protein 48 homolog B... | 0.03 | OrthoFinder output from all 47 species | |
Smo173081 | CDC48B | Cell division control protein 48 homolog B... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g04738 | emb1354, CDC48C | platform ATPase CDC48 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e021405_P001 | CIP111, Zm00001e021405 | Calmodulin-interacting protein 111 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e036688_P001 | emb1354, CDC48C,... | Cell division control protein 48 homolog C... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004526 | ribonuclease P activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090730 | Las1 complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
CC | GO:1902911 | protein kinase complex | IEP | HCCA |
CC | GO:1905348 | endonuclease complex | IEP | HCCA |
CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |