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  5. Solyc10g074400.3.1

Solyc10g074400.3.1 (HCHIB, B-CHI,...)


Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B, Solyc10g074400

Description : Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 208.0)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g074400.3.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Aev_g38851 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44515 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g09390.1 LOC_Os04g09390 Lectin OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Ore_g30042 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc00g500347.1.1 HCHIB, B-CHI,... Endochitinase A OS=Nicotiana tabacum... 0.01 OrthoFinder output from all 47 species
Solyc07g009500.3.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g055820.3.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc10g074390.1.1 HCHIB, B-CHI,... Endochitinase A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc10g074440.2.1 HCHIB, B-CHI,... Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 88 163
IPR001002 Chitin-bd_1 33 71
No external refs found!