Solyc10g055820.3.1 (HCHIB, B-CHI,...)

Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B, Solyc10g055820

Description : Basic 30 kDa endochitinase OS=Solanum lycopersicum (sp|q05538|chic_sollc : 523.0)

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc10g055820.3.1
Cluster	HCCA: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.03	OrthoFinder output from all 47 species
AMTR_s00001p00243570	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.02	OrthoFinder output from all 47 species
AMTR_s00001p00243680	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
AMTR_s00001p00243780	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.04	OrthoFinder output from all 47 species
AT2G43590	No alias	Chitinase family protein	0.09	OrthoFinder output from all 47 species
AT2G43610	No alias	Chitinase family protein	0.05	OrthoFinder output from all 47 species
Adi_g017574	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g06392	HCHIB, B-CHI,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g37269	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g38872	HCHIB, B-CHI,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g25708	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g35678	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g19889	ATEP3, EP3,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01007190001	HCHIB, B-CHI,...	Basic endochitinase OS=Vitis vinifera	0.14	OrthoFinder output from all 47 species
GSVIVT01007191001	No alias	No description available	0.05	OrthoFinder output from all 47 species
GSVIVT01038111001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01038113001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01038114001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01038116001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
Gb_07463	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_07464	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_20316	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.08	OrthoFinder output from all 47 species
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_29991	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.1	OrthoFinder output from all 47 species
Gb_29992	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.06	OrthoFinder output from all 47 species
Gb_29993	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.06	OrthoFinder output from all 47 species
Gb_34557	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Gb_34558	ATEP3, EP3,...	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os01g18400.1	LOC_Os01g18400	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os04g41620.1	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.1	OrthoFinder output from all 47 species
LOC_Os04g41680.1	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.09	OrthoFinder output from all 47 species
LOC_Os05g04690.1	LOC_Os05g04690	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os06g51050.1	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os06g51060.1	HCHIB, B-CHI,...	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os10g39680.1	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.03	OrthoFinder output from all 47 species
MA_10427514g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_114934g0010	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
MA_1327504g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_170598g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
MA_191308g0010	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
MA_5029466g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp2g24440.1	HCHIB, B-CHI,...	Endochitinase CH25 OS=Brassica napus...	0.03	OrthoFinder output from all 47 species
Mp4g20470.1	HCHIB, B-CHI,...	Basic endochitinase B OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Nbi_g34620	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g16816	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pnu_g31117	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c6_130V3.1	HCHIB, B-CHI,...	basic chitinase	0.02	OrthoFinder output from all 47 species
Ppi_g60891	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g13322	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g32164	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo428512	No alias	No description available	0.03	OrthoFinder output from all 47 species
Solyc02g082930.3.1	HCHIB, B-CHI,...	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.07	OrthoFinder output from all 47 species
Solyc04g072000.4.1	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc07g009530.1.1	HCHIB, B-CHI,...	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Solyc10g055780.1.1	HCHIB, B-CHI,...	Endochitinase B OS=Nicotiana tabacum...	0.03	OrthoFinder output from all 47 species
Solyc10g074400.3.1	HCHIB, B-CHI,...	Endochitinase OS=Solanum tuberosum (sp\|p05315\|chit_soltu : 208.0)	0.02	OrthoFinder output from all 47 species
Spa_g08849	ATEP3, EP3,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e002252_P001	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e025447_P001	Zm00001e025447	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008061	chitin binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	75	307
IPR001002	Chitin-bd_1	24	62

External Links

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Solyc10g055820.3.1 (HCHIB, B-CHI,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation