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  5. Solyc10g055780.1.1

Solyc10g055780.1.1 (HCHIB, B-CHI,...)


Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B, Solyc10g055780

Description : Endochitinase B OS=Nicotiana tabacum (sp|p24091|chi2_tobac : 300.0)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g055780.1.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT4G01700 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
Aev_g18092 HCHIB, B-CHI,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g38851 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44515 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g09390.1 LOC_Os04g09390 Lectin OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Solyc00g500347.1.1 HCHIB, B-CHI,... Endochitinase A OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc03g116230.4.1 HEL, PR4, PR-4,... Chitin-binding lectin 1 OS=Solanum tuberosum... 0.04 OrthoFinder output from all 47 species
Solyc07g009500.3.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g055820.3.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc10g074390.1.1 HCHIB, B-CHI,... Endochitinase A OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e002252_P001 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 2 155
No external refs found!