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  5. Solyc10g053970.2.1

Solyc10g053970.2.1 (Solyc10g053970)


Aliases : Solyc10g053970

Description : Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana (sp|f4ihj0|sfh8_arath : 858.0)


Gene families : OG0000242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc10g053970.2.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g087447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087448 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Ala_g02180 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Als_g62335 No alias phosphoinositide transfer protein *(SFH) & original... 0.03 OrthoFinder output from all 47 species
Msp_g01653 No alias phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g12817 ATSEC14, SEC14 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g13228 COW1, SRH1 phosphoinositide transfer protein *(SFH) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e014650_P002 SFH3, ATSFH3,... Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species
Zm00001e020048_P001 Zm00001e020048 Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species
Zm00001e022227_P001 Zm00001e022227 Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species
Zm00001e025323_P002 Zm00001e025323 Phosphatidylinositol/phosphatidylcholine transfer... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 154 320
IPR011074 CRAL/TRIO_N_dom 103 130
No external refs found!