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  5. Solyc10g012240.3.1

Solyc10g012240.3.1 (UBC5, Solyc10g012240)


Aliases : UBC5, Solyc10g012240

Description : ubiquitin-conjugating E2 protein


Gene families : OG0001369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g012240.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G46030 UBC6 ubiquitin-conjugating enzyme 6 0.03 OrthoFinder output from all 47 species
Adi_g074543 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Als_g04664 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Als_g06703 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Als_g47212 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Als_g53038 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031101 No alias E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.03 OrthoFinder output from all 47 species
Cba_g31592 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Cba_g38557 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G027100.1 UBC5, Ceric.04G027100 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.05 OrthoFinder output from all 47 species
Cre01.g027200 UBC5 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dde_g01297 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Gb_18257 UBC5 ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Lfl_g11127 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Msp_g21690 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g23719 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Smo58974 UBC5 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc11g071870.2.1 UBC5, Solyc11g071870 ubiquitin-conjugating E2 protein 0.01 OrthoFinder output from all 47 species
Spa_g19327 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 142
No external refs found!