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  5. Solyc10g006650.3.1

Solyc10g006650.3.1 (Solyc10g006650)


Aliases : Solyc10g006650

Description : Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 OS=Arabidopsis thaliana (sp|q6nqe2|fqrl1_arath : 299.0)


Gene families : OG0000544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc10g006650.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g008288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g35023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08733 No alias Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1... 0.02 OrthoFinder output from all 47 species
Gb_18226 No alias Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1... 0.03 OrthoFinder output from all 47 species
Len_g04556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005025 FMN_Rdtase-like 15 144
No external refs found!