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  5. Solyc09g090370.3.1

Solyc09g090370.3.1 (GTE1, GTE01, IMB1,...)


Aliases : GTE1, GTE01, IMB1, Solyc09g090370

Description : transcriptional co-activator (BET/GTE)


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g090370.3.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Adi_g114774 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Als_g30418 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Aob_g06548 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Aop_g02139 GTE1, GTE01, IMB1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06213 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G016200.1 BET9, ATBET9,... transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14312 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g45449 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01014233001 GTE4 Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020670001 GTE4 Transcription factor GTE4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01034328001 GTE1, GTE01, IMB1 Transcription factor GTE1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g11580.1 GTE4, LOC_Os01g11580 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
LOC_Os06g04640.1 GTE1, GTE01,... transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Ore_g25908 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Pir_g00429 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g20991 GTE8 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g00834 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Sam_g12555 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Sam_g13117 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009037_P001 Zm00001e009037 transcriptional co-activator (BET/GTE) 0.05 OrthoFinder output from all 47 species
Zm00001e029260_P001 BET9, ATBET9,... transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e029954_P002 GTE1, GTE01,... transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR027353 NET_dom 264 326
IPR001487 Bromodomain 105 190
No external refs found!