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  5. Solyc09g075000.3.1

Solyc09g075000.3.1 (Solyc09g075000)


Aliases : Solyc09g075000

Description : WD repeat-containing protein GTS1 OS=Arabidopsis thaliana (sp|q944s2|gts1_arath : 483.0)


Gene families : OG0006150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g075000.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g014868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020911.15 No alias WD repeat-containing protein GTS1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp1g14620.1 No alias WD repeat-containing protein GTS1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Smo127582 No alias WD repeat-containing protein GTS1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e020224_P001 Zm00001e020224 WD repeat-containing protein GTS1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 71 109
No external refs found!