Solyc09g065660.4.1 (AT-HSFA6B, HSFA6B,...)


Aliases : AT-HSFA6B, HSFA6B, Solyc09g065660

Description : transcription factor (HSF)


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g065660.4.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT2G26150 HSFA2, ATHSFA2 heat shock transcription factor A2 0.08 OrthoFinder output from all 47 species
AT3G51910 AT-HSFA7A, HSFA7A heat shock transcription factor A7A 0.05 OrthoFinder output from all 47 species
AT3G63350 HSFA7B, AT-HSFA7B winged-helix DNA-binding transcription factor family protein 0.03 OrthoFinder output from all 47 species
Aev_g32508 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12580 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22391 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16680 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22001 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13631 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14953 ATHSF1, HSF1,... transcriptional regulator *(HsfA1) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g37621 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42490 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003118001 AT-HSFA6B, HSFA6B RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
GSVIVT01019829001 AT-HSFB2B, HSFB2B RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
GSVIVT01035385001 HSFA2, ATHSFA2 RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
Gb_11758 AT-HSFA6B, HSFA6B transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 OrthoFinder output from all 47 species
Gb_16343 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.11 OrthoFinder output from all 47 species
LOC_Os04g48030.1 AT-HSFB2B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35790.1 AT-HSFB2A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28340.1 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Lfl_g08915 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09948 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21051 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19094 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62261 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02775 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06198 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo107503 ATHSF1, HSF1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
Spa_g08441 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20093 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000467_P001 AT-HSFA6B,... transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
Zm00001e003755_P002 AT-HSFB2A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Zm00001e004752_P001 AT-HSFA6B,... transcription factor (HSF) 0.05 OrthoFinder output from all 47 species
Zm00001e024268_P001 AT-HSFB2A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Zm00001e034782_P002 AT-HSFB2A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Zm00001e037165_P002 AT-HSFA7A,... transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
Zm00001e041441_P001 AT-HSFB2A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 44 133
No external refs found!