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  5. Solyc09g011850.4.1

Solyc09g011850.4.1 (FLN1, Solyc09g011850)


Aliases : FLN1, Solyc09g011850

Description : PAP6/FLN1 cofactor of plastid-encoded RNA polymerase


Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc09g011850.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00193710 FLN1,... Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AMTR_s00029p00193780 FLN1,... Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT3G54090 FLN1 fructokinase-like 1 0.21 OrthoFinder output from all 47 species
Ala_g18551 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Als_g03718 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.05 OrthoFinder output from all 47 species
Aop_g00620 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.05 OrthoFinder output from all 47 species
Aspi01Gene38593.t1 FLN1, Aspi01Gene38593 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.05 OrthoFinder output from all 47 species
Azfi_s0098.g043926 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.02 OrthoFinder output from all 47 species
Azfi_s2046.g108873 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Ceric.1Z102700.1 FLN1, Ceric.1Z102700 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.07 OrthoFinder output from all 47 species
Dde_g02252 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.03 OrthoFinder output from all 47 species
Gb_05959 FLN1 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.05 OrthoFinder output from all 47 species
Gb_07834 FLN1 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.07 OrthoFinder output from all 47 species
LOC_Os01g63220.2 FLN1, LOC_Os01g63220 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Len_g15047 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.04 OrthoFinder output from all 47 species
MA_659042g0010 FLN1 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Mp7g17740.1 FLN1 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.08 OrthoFinder output from all 47 species
Ppi_g61036 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.04 OrthoFinder output from all 47 species
Sam_g16839 No alias cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.02 OrthoFinder output from all 47 species
Spa_g08868 FLN1 cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... 0.02 OrthoFinder output from all 47 species
Zm00001e019266_P002 FLN1, Zm00001e019266 PAP6/FLN1 cofactor of plastid-encoded RNA polymerase 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR011611 PfkB_dom 137 450
No external refs found!