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  5. Solyc09g011080.3.1

Solyc09g011080.3.1 (RCA, Solyc09g011080)


Aliases : RCA, Solyc09g011080

Description : ATP-dependent activase involved in RuBisCo regulation


Gene families : OG0001509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g011080.3.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Adi_g007841 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Adi_g060599 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Adi_g079810 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Aev_g12706 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene66678.t1 RCA, Aspi01Gene66678 ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Dac_g13179 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016501001 RCA Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
GSVIVT01024910001 RCA Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
GSVIVT01034123001 RCA Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Gb_37968 RCA ATP-dependent activase involved in RuBisCo regulation 0.02 OrthoFinder output from all 47 species
LOC_Os11g47970.1 RCA, LOC_Os11g47970 ATP-dependent activase involved in RuBisCo regulation 0.03 OrthoFinder output from all 47 species
Smo268623 RCA Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Tin_g03996 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.02 OrthoFinder output from all 47 species
Tin_g07636 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Zm00001e020927_P001 RCA, Zm00001e020927 ATP-dependent activase involved in RuBisCo regulation 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 164 305
No external refs found!