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  5. Solyc09g005600.3.1

Solyc09g005600.3.1 (Solyc09g005600)


Aliases : Solyc09g005600

Description : no hits & (original description: none)


Gene families : OG0002049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g005600.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G05570 No alias transducin family protein / WD-40 repeat family protein 0.05 OrthoFinder output from all 47 species
Ala_g07812 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Aob_g25755 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ceric.04G073600.1 Ceric.04G073600 regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Cre12.g558250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05823 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Dde_g04947 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032802001 No alias No description available 0.05 OrthoFinder output from all 47 species
Lfl_g02377 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
MA_1162212g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7753240g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8863348g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g09160.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g29227 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0377.g027318 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Spa_g05717 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR001388 Synaptobrevin-like 1053 1102
No external refs found!