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  5. Solyc08g081830.3.1

Solyc08g081830.3.1 (Solyc08g081830)


Aliases : Solyc08g081830

Description : Uncharacterized protein At5g41620 OS=Arabidopsis thaliana (sp|q66gq2|y5162_arath : 354.0)


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081830.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G11690 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g17248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012735001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
GSVIVT01037646001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os05g41910.1 LOC_Os05g41910 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g09170.1 LOC_Os08g09170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g29743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429999g0020 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g49927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017243 No alias not classified & original description: CDS=1-1026 0.03 OrthoFinder output from all 47 species
Sam_g15742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g064580.3.1 Solyc07g064580 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g083190.3.1 Solyc10g083190 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g07954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039960_P001 Zm00001e039960 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!