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  5. Solyc08g081480.3.1

Solyc08g081480.3.1 (Solyc08g081480)


Aliases : Solyc08g081480

Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 726.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 57.3)


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081480.3.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00258260 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00045p00118570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AMTR_s00107p00122980 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00209p00025840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT1G19170 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G23900 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16850 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G23820 No alias Pectin lyase-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT5G41870 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g044640 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06554 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13749 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11539 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37014 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12302 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16676 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05528 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g10736 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03570 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07611 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g08849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13296 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15261 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17762 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26386 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01028860001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
Gb_17217 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os01g43160.1 LOC_Os01g43160 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os02g15690.1 LOC_Os02g15690 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
LOC_Os05g50960.1 LOC_Os05g50960 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
LOC_Os12g36810.1 LOC_Os12g36810 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Len_g04743 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07468 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38310 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40756 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
MA_88519g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Msp_g24778 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15019 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g35798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43420 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49091 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10358 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10961 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25453 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g049980.3.1 Solyc05g049980 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Spa_g39269 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24209 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g41128 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021051_P001 Zm00001e021051 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e023760_P001 Zm00001e023760 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Zm00001e026646_P002 Zm00001e026646 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029809_P002 Zm00001e029809 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 150 431
No external refs found!