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  5. Solyc08g081090.1.1

Solyc08g081090.1.1 (3-Oct, ATOCT3, Solyc08g081090)


Aliases : 3-Oct, ATOCT3, Solyc08g081090

Description : organic cation transporter (OCT)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081090.1.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00167630 AtOCT1, 1-Oct,... Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00183130 3-Oct, ATOCT3,... Organic cation/carnitine transporter 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G79410 AtOCT5, 5-Oct organic cation/carnitine transporter5 0.03 OrthoFinder output from all 47 species
Ehy_g04747 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g22710.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 87 500
No external refs found!