Solyc08g080170.3.1 (FKP1, EMB2778, MVA1,...)

Aliases : FKP1, EMB2778, MVA1, HMGS, Solyc08g080170

Description : 3-hydroxy-3-methylglutaryl-CoA synthase

Gene families : OG0002570 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002570_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g080170.3.1
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
AT4G11820	FKP1, EMB2778, MVA1, HMGS	hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /...	0.06	OrthoFinder output from all 47 species
Aev_g19192	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene23356.t1	FKP1, EMB2778,...	EC_2.3 acyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.08G043700.1	FKP1, EMB2778,...	EC_2.3 acyltransferase & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.39G005200.1	FKP1, EMB2778,...	EC_2.3 acyltransferase & original description:...	0.05	OrthoFinder output from all 47 species
Dcu_g12761	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_10410	FKP1, EMB2778, MVA1, HMGS	3-hydroxy-3-methylglutaryl-CoA synthase	0.04	OrthoFinder output from all 47 species
Gb_11303	FKP1, EMB2778, MVA1, HMGS	3-hydroxy-3-methylglutaryl-CoA synthase	0.04	OrthoFinder output from all 47 species
Gb_11304	FKP1, EMB2778, MVA1, HMGS	3-hydroxy-3-methylglutaryl-CoA synthase	0.04	OrthoFinder output from all 47 species
Gb_19737	FKP1, EMB2778, MVA1, HMGS	3-hydroxy-3-methylglutaryl-CoA synthase	0.02	OrthoFinder output from all 47 species
LOC_Os09g34960.1	FKP1, EMB2778,...	3-hydroxy-3-methylglutaryl-CoA synthase	0.04	OrthoFinder output from all 47 species
MA_101113g0020	FKP1, EMB2778, MVA1, HMGS	3-hydroxy-3-methylglutaryl-CoA synthase	0.04	OrthoFinder output from all 47 species
MA_261222g0010	FKP1, EMB2778, MVA1, HMGS	3-hydroxy-3-methylglutaryl-CoA synthase	0.01	OrthoFinder output from all 47 species
Mp4g22640.1	FKP1, EMB2778, MVA1, HMGS	3-hydroxy-3-methylglutaryl-CoA synthase	0.06	OrthoFinder output from all 47 species
Msp_g06932	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g12122	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.08	OrthoFinder output from all 47 species
Msp_g21030	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g02939	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009988	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: CDS=248-1342	0.03	OrthoFinder output from all 47 species
Smo179152	FKP1, EMB2778, MVA1, HMGS	Secondary metabolism.terpenoids.mevalonate...	0.03	OrthoFinder output from all 47 species
Spa_g14666	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g31141	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e034733_P001	FKP1, EMB2778,...	3-hydroxy-3-methylglutaryl-CoA synthase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004421	hydroxymethylglutaryl-CoA synthase activity	IEA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
MF	GO:0016229	steroid dehydrogenase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030259	lipid glycosylation	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0047750	cholestenol delta-isomerase activity	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013746	HMG_CoA_synt_C_dom	178	452
IPR013528	HMG_CoA_synth_N	5	177

External Links

No external refs found!

Solyc08g080170.3.1 (FKP1, EMB2778, MVA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation