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Aliases : G2484-1, ATG2484-1, Solyc08g078530
Description : no hits & (original description: none)
Gene families : OG0002573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002573_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00106p00148070 | G2484-1,... | No description available | 0.07 | OrthoFinder output from all 47 species | |
| AT4G17330 | G2484-1, ATG2484-1 | G2484-1 protein | 0.15 | OrthoFinder output from all 47 species | |
| Adi_g077944 | G2484-1, ATG2484-1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g087228 | G2484-1, ATG2484-1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g07336 | G2484-1, ATG2484-1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g27665 | G2484-1, ATG2484-1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12999 | G2484-1, ATG2484-1 | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Als_g23052 | G2484-1, ATG2484-1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g64007 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g12306 | G2484-1, ATG2484-1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g09060 | G2484-1, ATG2484-1 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Azfi_s0099.g044091 | G2484-1, ATG2484-1 | not classified & original description: CDS=19-6000 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0109.g045368 | No alias | EC_2.7 transferase transferring phosphorus-containing... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22302 | G2484-1, ATG2484-1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G054700.1 | Ceric.36G054700 | not classified & original description: pacid=50568782... | 0.14 | OrthoFinder output from all 47 species | |
| Dac_g20555 | G2484-1, ATG2484-1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g12709 | G2484-1, ATG2484-1 | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Dde_g04956 | G2484-1, ATG2484-1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01004716001 | G2484-1, ATG2484-1 | No description available | 0.13 | OrthoFinder output from all 47 species | |
| Gb_04223 | G2484-1, ATG2484-1 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_15039 | G2484-1, ATG2484-1 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os10g41030.1 | G2484-1,... | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Len_g14749 | G2484-1, ATG2484-1 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g03523 | G2484-1, ATG2484-1 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| MA_20337g0010 | G2484-1, ATG2484-1 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g39520 | G2484-1, ATG2484-1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09007 | G2484-1, ATG2484-1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g12137 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g12170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25098 | G2484-1, ATG2484-1 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g39400 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g09835 | G2484-1, ATG2484-1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g07039 | G2484-1, ATG2484-1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16311 | G2484-1, ATG2484-1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014511 | G2484-1, ATG2484-1 | not classified & original description: CDS=645-7112 | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g18066 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g22635 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo415212 | G2484-1, ATG2484-1 | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Smo444321 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29421 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g33264 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g49740 | G2484-1, ATG2484-1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g08474 | G2484-1, ATG2484-1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002323_P004 | G2484-1,... | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e037875_P005 | G2484-1,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008395 | Agenet-like_dom | 1691 | 1757 |
| No external refs found! |