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  5. Solyc08g074950.2.1

Solyc08g074950.2.1 (Solyc08g074950)


Aliases : Solyc08g074950

Description : pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc08g074950.2.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72613 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G052600.1 Ceric.27G052600 not classified & original description: pacid=50605299... 0.03 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10376612g0010 No alias Pectin acetylesterase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435510g0010 No alias pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc10g050750.3.1 Solyc10g050750 pectin acetylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 7 343
No external refs found!