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  5. Solyc08g069160.3.1

Solyc08g069160.3.1 (Solyc08g069160)


Aliases : Solyc08g069160

Description : no hits & (original description: none)


Gene families : OG0000943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g069160.3.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT4G31270 No alias sequence-specific DNA binding transcription factors 0.04 OrthoFinder output from all 47 species
Dac_g09362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g06180.1 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g16790.1 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g06851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!