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  5. Solyc08g062800.3.1

Solyc08g062800.3.1 (EIF4A-2, Solyc08g062800)


Aliases : EIF4A-2, Solyc08g062800

Description : mRNA unwinding factor (eIF4A)


Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g062800.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00181640 EIF4A-2,... Protein biosynthesis.translation initiation.mRNA... 0.05 OrthoFinder output from all 47 species
AT1G51380 No alias DEA(D/H)-box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
AT1G72730 No alias DEA(D/H)-box RNA helicase family protein 0.1 OrthoFinder output from all 47 species
AT3G13920 TIF4A1, EIF4A1, RH4 eukaryotic translation initiation factor 4A1 0.05 OrthoFinder output from all 47 species
AT3G19760 EIF4A-III eukaryotic initiation factor 4A-III 0.03 OrthoFinder output from all 47 species
Adi_g078502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07810 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10607 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07229 EIF4A-2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13754 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03471 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13177 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g14573 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g71080 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75441 EIF4A-2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G044600.1 EIF4A-2, Ceric.14G044600 mRNA unwinding factor *(eIF4A)) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G079100.1 EIF4A-2, Ceric.21G079100 mRNA unwinding factor *(eIF4A)) & original description:... 0.12 OrthoFinder output from all 47 species
Cre06.g298650 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.04 OrthoFinder output from all 47 species
Dac_g03718 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10266 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21828 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04548 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035374001 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.04 OrthoFinder output from all 47 species
Len_g10654 EIF4A-2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04610 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04684 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23612 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g29402 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.06 OrthoFinder output from all 47 species
Mp2g02760.1 EIF4A-2 mRNA unwinding factor (eIF4A) 0.33 OrthoFinder output from all 47 species
Msp_g08580 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12910 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13467 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14903 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.03 OrthoFinder output from all 47 species
Pp3c6_1080V3.1 EIF4A-2, Pp3c6_1080 eukaryotic translation initiation factor 4A1 0.05 OrthoFinder output from all 47 species
Pp3c7_3770V3.1 EIF4A-2, Pp3c7_3770 eukaryotic translation initiation factor 4A1 0.03 OrthoFinder output from all 47 species
Pp3s93_30V3.1 EIF4A-2, Pp3s93_30 eukaryotic translation initiation factor 4A1 0.02 OrthoFinder output from all 47 species
Sam_g10962 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23496 No alias mRNA unwinding factor *(eIF4A)) & original description: none 0.11 OrthoFinder output from all 47 species
Smo143895 EIF4A-2 Protein biosynthesis.translation initiation.mRNA... 0.15 OrthoFinder output from all 47 species
Spa_g24980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40551 EIF4A-III helicase component *(eIF4A3) of RNA quality control Exon... 0.04 OrthoFinder output from all 47 species
Tin_g03932 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g05567 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013648_P002 EIF4A-2, Zm00001e013648 mRNA unwinding factor (eIF4A) 0.02 OrthoFinder output from all 47 species
Zm00001e016284_P001 EIF4A-III, Zm00001e016284 helicase component eIF4A3 of RNA quality control Exon... 0.06 OrthoFinder output from all 47 species
Zm00001e030233_P004 EIF4A-2, Zm00001e030233 mRNA unwinding factor (eIF4A) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 266 374
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
No external refs found!