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  5. Solyc08g014560.3.1

Solyc08g014560.3.1 (Solyc08g014560)


Aliases : Solyc08g014560

Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 385.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 220.0)


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g014560.3.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00198650 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00250890 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00096p00105250 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00104p00026540 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT1G02460 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G10640 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G56710 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G60590 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G41850 ADPG2, PGAZAT polygalacturonase abscission zone A. thaliana 0.04 OrthoFinder output from all 47 species
AT3G26610 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G01890 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G14650 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g112354 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g36775 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04943 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14084 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12304 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13416.t1 Aspi01Gene13416 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44829.t1 Aspi01Gene44829 EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene46867.t1 Aspi01Gene46867 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0157.g053776 No alias EC_3.2 glycosylase & original description: CDS=175-1677 0.06 OrthoFinder output from all 47 species
Azfi_s0246.g060021 No alias EC_3.2 glycosylase & original description: CDS=1-1317 0.02 OrthoFinder output from all 47 species
Ceric.20G025000.1 Ceric.20G025000 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g11602 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03879 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37611 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43003 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44374 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09828 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008061001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01008062001 No alias Polygalacturonase OS=Juniperus ashei 0.05 OrthoFinder output from all 47 species
GSVIVT01013772001 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01017302001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01028132001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028189001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01031298001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01032114001 QRT2 Polygalacturonase OS=Actinidia deliciosa 0.04 OrthoFinder output from all 47 species
GSVIVT01032117001 QRT2 Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01032118001 QRT2 Cell wall.pectin.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01032447001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01033362001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01033364001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01038447001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05788 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_12018 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_13004 No alias polygalacturonase (PGX1) 0.02 OrthoFinder output from all 47 species
Gb_27331 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 OrthoFinder output from all 47 species
Gb_33196 No alias Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
LOC_Os01g07790.1 QRT2, LOC_Os01g07790 Probable polygalacturonase At3g15720 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os03g59330.1 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.05 OrthoFinder output from all 47 species
LOC_Os05g20020.1 LOC_Os05g20020 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g46510.1 LOC_Os05g46510 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g23790.1 LOC_Os08g23790 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14400.1 LOC_Os11g14400 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Len_g55532 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19271 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_101764g0010 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10426591g0010 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10431579g0010 No alias Polygalacturonase OS=Cryptomeria japonica... 0.03 OrthoFinder output from all 47 species
MA_13282g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.09 OrthoFinder output from all 47 species
MA_427851g0010 No alias Polygalacturonase OS=Cryptomeria japonica... 0.02 OrthoFinder output from all 47 species
MA_63122g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 OrthoFinder output from all 47 species
Nbi_g11845 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42249 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45275 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35940 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24091 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03112 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64037 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15323 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Smo111266 ADPG2, PGAZAT Polygalacturonase OS=Chamaecyparis obtusa 0.05 OrthoFinder output from all 47 species
Smo78038 No alias Cell wall.pectin.modification and... 0.04 OrthoFinder output from all 47 species
Solyc01g100980.4.1 Solyc01g100980 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g015530.3.1 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.04 OrthoFinder output from all 47 species
Solyc05g005040.4.1 Solyc05g005040 polygalacturonase (PGX1) 0.04 OrthoFinder output from all 47 species
Solyc07g041650.3.1 Solyc07g041650 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 OrthoFinder output from all 47 species
Solyc10g047570.2.1 Solyc10g047570 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 OrthoFinder output from all 47 species
Solyc10g047590.3.1 Solyc10g047590 Polygalacturonase OS=Gossypium hirsutum... 0.03 OrthoFinder output from all 47 species
Solyc12g009420.3.1 QRT2, Solyc12g009420 Polygalacturonase QRT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g30681 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39658 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006091_P001 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.03 OrthoFinder output from all 47 species
Zm00001e011814_P002 ADPG2, PGAZAT,... Polygalacturonase OS=Actinidia deliciosa... 0.03 OrthoFinder output from all 47 species
Zm00001e013553_P001 Zm00001e013553 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e017465_P001 Zm00001e017465 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020373_P001 Zm00001e020373 polygalacturonase (PGX1) 0.02 OrthoFinder output from all 47 species
Zm00001e027720_P001 Zm00001e027720 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e032294_P001 Zm00001e032294 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e036989_P001 Zm00001e036989 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 57 381
No external refs found!