Solyc08g007270.4.1 (HB-2, ATHB2, ATHB-2,...)

Aliases : HB-2, ATHB2, ATHB-2, HAT4, Solyc08g007270

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000538_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g007270.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00233150	HAT22,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
AT2G22800	HAT9	Homeobox-leucine zipper protein family	0.03	OrthoFinder output from all 47 species
Adi_g003788	HAT22	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g020651	HAT1	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g040538	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g048337	HB-2, ATHB2, ATHB-2, HAT4	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g060092	HB-2, ATHB2, ATHB-2, HAT4	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g078643	HB-2, ATHB2, ATHB-2, HAT4	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g081130	HAT2	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g082135	HAT22	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g106585	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aev_g11311	HAT14	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ala_g03647	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g06206	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g10374	HAT14	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene49352.t1	HB-2, ATHB2,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g33158	HAT14	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g10914	HAT3	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Dcu_g32935	HB-2, ATHB2, ATHB-2, HAT4	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g07334	HAT3	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dde_g50611	HAT22	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g23304	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
LOC_Os01g45570.1	ATHB17, HB17,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os02g05640.1	HB-2, ATHB2,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os03g12860.1	HAT22, LOC_Os03g12860	transcription factor (HD-ZIP I/II)	0.07	OrthoFinder output from all 47 species
Len_g11143	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
MA_57689g0010	HAT14	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Msp_g35988	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g24190	HAT14	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g35413	HAT22	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g11047	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc02g063520.3.1	HAT22, Solyc02g063520	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
Solyc04g077220.3.1	HAT22, Solyc04g077220	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Spa_g22399	HAT14	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e000928_P002	HAT22, Zm00001e000928	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Zm00001e009939_P001	HAT14, Zm00001e009939	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e020345_P001	ATHB17, HB17,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Zm00001e036545_P001	HAT3, Zm00001e036545	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e038644_P001	HAT22, Zm00001e038644	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	168	202
IPR001356	Homeobox_dom	112	166
IPR006712	HD-ZIP_N	1	84

External Links

No external refs found!

Solyc08g007270.4.1 (HB-2, ATHB2, ATHB-2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation