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  5. Solyc07g065680.3.1

Solyc07g065680.3.1 (Solyc07g065680)


Aliases : Solyc07g065680

Description : WEB family protein At5g55860 OS=Arabidopsis thaliana (sp|q9lvq4|y5586_arath : 341.0)


Gene families : OG0000579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g065680.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g010449 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14521 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000960 No alias not classified & original description: CDS=6-1973 0.04 OrthoFinder output from all 47 species
Ceric.1Z051600.1 Ceric.1Z051600 not classified & original description: pacid=50565823... 0.03 OrthoFinder output from all 47 species
Msp_g19610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008545 Web 19 569
No external refs found!