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  5. Solyc07g062530.3.1

Solyc07g062530.3.1 (ATPPC3, PPC3, Solyc07g062530)


Aliases : ATPPC3, PPC3, Solyc07g062530

Description : PEP carboxylase


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062530.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14940 ATPPC3, PPC3 phosphoenolpyruvate carboxylase 3 0.05 OrthoFinder output from all 47 species
Aev_g30833 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06071 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09049 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14717 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32641 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G026100.1 ATPPC3, PPC3,... EC_4.1 carbon-carbon lyase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g05789 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08955 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11765 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011979001 ATPPC4, PPC4 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.04 OrthoFinder output from all 47 species
GSVIVT01020705001 ATPPC3, PPC3 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.05 OrthoFinder output from all 47 species
Gb_39797 ATPPC3, PPC3 PEP carboxylase 0.02 OrthoFinder output from all 47 species
Len_g30934 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06687 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14233 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_34134g0010 PEPC1, ATPEPC1,... Phosphoenolpyruvate carboxylase OS=Picea abies... 0.02 OrthoFinder output from all 47 species
Mp1g11340.1 PPC2, ATPPC2 PEP carboxylase 0.02 OrthoFinder output from all 47 species
Msp_g07365 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20098 ATPPC3, PPC3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20099 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g007290.4.1 ATPPC3, PPC3,... PEP carboxylase 0.05 OrthoFinder output from all 47 species
Tin_g11401 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014333_P001 ATPPC3, PPC3,... PEP carboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 163 964
No external refs found!