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  5. Solyc07g062060.3.1

Solyc07g062060.3.1 (MSRB1, ATMSRB1, Solyc07g062060)


Aliases : MSRB1, ATMSRB1, Solyc07g062060

Description : Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica (sp|q0dc89|msrb1_orysj : 238.0)


Gene families : OG0001255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062060.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00142080 MSRB2,... Peptide methionine sulfoxide reductase B2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ala_g10453 MSRB1, ATMSRB1 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.03 OrthoFinder output from all 47 species
Als_g37394 MSRB2 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Aob_g06983 MSRB2 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Cba_g08127 MSRB2 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.03 OrthoFinder output from all 47 species
Cre14.g615000 MSRB2 Peptide methionine sulfoxide reductase B2, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dcu_g12793 MSRB1, ATMSRB1 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Dde_g12965 MSRB2 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.04 OrthoFinder output from all 47 species
Len_g47772 MSRB2 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.03 OrthoFinder output from all 47 species
Lfl_g00403 MSRB2 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Mp7g06110.1 MSRB1, ATMSRB1 Peptide methionine sulfoxide reductase B1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g15388 MSRB1, ATMSRB1 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Sam_g14138 No alias methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.04 OrthoFinder output from all 47 species
Zm00001e030906_P001 MSRB1, ATMSRB1,... Peptide methionine sulfoxide reductase B1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002579 Met_Sox_Rdtase_MsrB_dom 87 205
No external refs found!