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  5. Solyc07g045460.3.1

Solyc07g045460.3.1 (AKINBETA1, Solyc07g045460)


Aliases : AKINBETA1, Solyc07g045460

Description : regulatory subunit beta of SNF1-related SnRK1 kinase complex. regulatory subunit beta of SnRK1 kinase complex


Gene families : OG0000948 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g045460.3.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g01534 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.01 OrthoFinder output from all 47 species
Dcu_g48715 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g00892 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009756 AKINBETA1 not classified & original description: CDS=1-453 0.05 OrthoFinder output from all 47 species
Solyc12g099970.2.1 AKINBETA1, Solyc12g099970 regulatory subunit beta of SNF1-related SnRK1 kinase... 0.05 OrthoFinder output from all 47 species
Tin_g44972 AKINBETA1 regulatory subunit beta of SnRK1 kinase complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e018410_P001 Zm00001e018410 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR006828 ASC_dom 214 282
IPR032640 AMPK1_CBM 99 178
No external refs found!