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  5. Solyc06g084480.3.1

Solyc06g084480.3.1 (DEGP2, Solyc06g084480)


Aliases : DEGP2, Solyc06g084480

Description : protease (Deg)


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084480.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00143260 DEGP2,... Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder output from all 47 species
AT2G47940 DEGP2 DEGP protease 2 0.06 OrthoFinder output from all 47 species
Aev_g01298 DEGP2 protease *(Deg) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g12615 DEGP2 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07091 DEGP2 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g18056 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G009600.1 DEGP2, Ceric.06G009600 protease *(Deg) & original description: pacid=50619443... 0.07 OrthoFinder output from all 47 species
Dde_g17085 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011007001 DEGP2 Protein degradation.peptidase families.serine-type... 0.07 OrthoFinder output from all 47 species
Gb_10855 DEGP2 protease (Deg) 0.08 OrthoFinder output from all 47 species
LOC_Os05g05480.1 DEGP2, LOC_Os05g05480 protease (Deg) 0.04 OrthoFinder output from all 47 species
Len_g20948 DEGP2 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g34778 DEGP2 protease *(Deg) & original description: none 0.06 OrthoFinder output from all 47 species
Mp3g23130.1 DegP9 protease (Deg) 0.06 OrthoFinder output from all 47 species
Msp_g06586 DEGP2 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g12789 DegP10 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24747 DEGP2 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11733 DEGP2 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13145 DEGP2 protease *(Deg) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06908 DEGP2 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36565 No alias protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Smo100929 DEGP2 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Spa_g12286 DEGP2 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040416_P002 DEGP2, Zm00001e040416 protease (Deg) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 439 579
No external refs found!