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  5. Solyc06g084050.4.1

Solyc06g084050.4.1 (PSBW, Solyc06g084050)


Aliases : PSBW, Solyc06g084050

Description : component PsbW of PS-II complex


Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084050.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266120 PSBW,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.18 OrthoFinder output from all 47 species
AT2G30570 PSBW photosystem II reaction center W 0.27 OrthoFinder output from all 47 species
Aev_g47226 MAC3A not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ala_g04986 No alias component *(PsbW) of PS-II complex & original description: none 0.18 OrthoFinder output from all 47 species
Als_g12837 PSBW component *(PsbW) of PS-II complex & original description: none 0.17 OrthoFinder output from all 47 species
Als_g56334 PSBW component *(PsbW) of PS-II complex & original description: none 0.17 OrthoFinder output from all 47 species
Aob_g15176 No alias component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g27769 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32667 PSBW component *(PsbW) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g35726 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g19325 No alias component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30138 PSBW component *(PsbW) of PS-II complex & original description: none 0.17 OrthoFinder output from all 47 species
Aop_g41217 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42600.t1 PSBW, Aspi01Gene42600 component *(PsbW) of PS-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene48046.t1 PSBW, Aspi01Gene48046 component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0036.g025757 PSBW component *(PsbW) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g31817 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G036500.1 PSBW, Ceric.06G036500 component *(PsbW) of PS-II complex & original... 0.11 OrthoFinder output from all 47 species
Ceric.32G066400.1 PSBW, Ceric.32G066400 component *(PsbW) of PS-II complex & original... 0.23 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001234.7 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
Dac_g08641 PSBW component *(PsbW) of PS-II complex & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g00119 PSBW component *(PsbW) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g18523 PSBW component *(PsbW) of PS-II complex & original description: none 0.18 OrthoFinder output from all 47 species
Dcu_g41397 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06290 PSBW component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20782 PSBW component *(PsbW) of PS-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Ehy_g00627 PSBW component *(PsbW) of PS-II complex & original description: none 0.15 OrthoFinder output from all 47 species
Ehy_g01886 PSBW component *(PsbW) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g04368 PSBW component *(PsbW) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01000743001 PSBW Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.16 OrthoFinder output from all 47 species
GSVIVT01036277001 PSBW Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.12 OrthoFinder output from all 47 species
Gb_40726 PSBW component PsbW of PS-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g56680.2 PSBW, LOC_Os01g56680 component PsbW of PS-II complex 0.26 OrthoFinder output from all 47 species
LOC_Os05g43310.1 PSBW, LOC_Os05g43310 component PsbW of PS-II complex 0.1 OrthoFinder output from all 47 species
Len_g30946 PSBW component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Len_g36588 PSBW component *(PsbW) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g00156 PSBW component *(PsbW) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g17355 PSBW component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19670 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19837 No alias component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431532g0010 PSBW component PsbW of PS-II complex 0.12 OrthoFinder output from all 47 species
Mp5g14190.1 PSBW component PsbW of PS-II complex 0.37 OrthoFinder output from all 47 species
Msp_g20236 PSBW component *(PsbW) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g20237 PSBW component *(PsbW) of PS-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Msp_g44518 PSBW component *(PsbW) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g10497 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23251 PSBW component *(PsbW) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g31677 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06296 PSBW component *(PsbW) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Pnu_g12705 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33298 No alias component *(PsbW) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c18_6770V3.1 PSBW, Pp3c18_6770 photosystem II reaction center W 0.1 OrthoFinder output from all 47 species
Pp3c22_16330V3.1 PSBW, Pp3c22_16330 photosystem II reaction center W 0.1 OrthoFinder output from all 47 species
Ppi_g09458 No alias component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09459 No alias component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11136 PSBW component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25239 No alias component *(PsbW) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g27961 No alias component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019011 PSBW component *(PsbW) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g37413 No alias component *(PsbW) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39267 No alias component *(PsbW) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01488 PSBW component *(PsbW) of PS-II complex & original description: none 0.19 OrthoFinder output from all 47 species
Spa_g23538 PSBW component *(PsbW) of PS-II complex & original description: none 0.18 OrthoFinder output from all 47 species
Spa_g48859 PSBW component *(PsbW) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g52574 PSBW component *(PsbW) of PS-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g24382 PSBW component *(PsbW) of PS-II complex & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g24383 PSBW component *(PsbW) of PS-II complex & original description: none 0.14 OrthoFinder output from all 47 species
Zm00001e019660_P002 PSBW, Zm00001e019660 component PsbW of PS-II complex 0.19 OrthoFinder output from all 47 species
Zm00001e027386_P002 PSBW, Zm00001e027386 component PsbW of PS-II complex 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 4 128
No external refs found!