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  5. Solyc06g082900.3.1

Solyc06g082900.3.1 (MED19A, Solyc06g082900)


Aliases : MED19A, Solyc06g082900

Description : component MED19 of head module of MEDIATOR transcription co-activator complex


Gene families : OG0003365 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003365_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g082900.3.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cba_g70725 MED19A component *(MED19) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
GSVIVT01001920001 MED19A RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Len_g57250 MED19A component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Mp5g04790.1 MED19A component MED19 of head module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Pnu_g24485 MED19A component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Zm00001e018131_P001 Zm00001e018131 component MED19 of head module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!