Aliases : Solyc06g073120
Description : no hits & (original description: none)
Gene families : OG0006159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006159_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc06g073120.4.1 | |
Cluster | HCCA: Cluster_105 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G12650 | No alias | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g19142 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Mp3g16370.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Ore_g32650 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0152.g023457 | No alias | not classified & original description: CDS=98-835 | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010198_P002 | Zm00001e010198 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000469 | cleavage involved in rRNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009292 | RRP36 | 69 | 234 |
No external refs found! |