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  5. Solyc06g071200.3.1

Solyc06g071200.3.1 (Solyc06g071200)


Aliases : Solyc06g071200

Description : TNPO3 nucleocytoplasmic transport karyopherin


Gene families : OG0004537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g071200.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g24041 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.04 OrthoFinder output from all 47 species
Aob_g33942 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.04 OrthoFinder output from all 47 species
LOC_Os10g33770.1 LOC_Os10g33770 TNPO3 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Lfl_g36168 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002526 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Zm00001e004571_P001 Zm00001e004571 TNPO3 nucleocytoplasmic transport karyopherin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 26 90
IPR013598 Exportin-1/Importin-b-like 98 243
No external refs found!