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Aliases : Solyc06g054280
Description : no hits & (original description: none)
Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g054280.1.1 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G05980 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G19200 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G50640 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.15 | OrthoFinder output from all 47 species | |
| AT4G34419 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G19340 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g116381 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g01320 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05194 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17811 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08176 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54470.t1 | Aspi01Gene54470 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene61199.t1 | Aspi01Gene61199 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.38G065600.1 | Ceric.38G065600 | not classified & original description: pacid=50580642... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g09049 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g40338 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01022142001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g06960.1 | LOC_Os02g06960 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g52490.2 | LOC_Os02g52490 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g52800.1 | LOC_Os04g52800 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g41660.1 | LOC_Os12g41660 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g11864 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g59008 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g00820.1 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04362 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14274 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0076.g017462 | No alias | not classified & original description: CDS=1-2376 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g108170.3.1 | Solyc01g108170 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g075740.1.1 | Solyc09g075740 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05577 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10999 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14730 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015934_P003 | Zm00001e015934 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e023821_P002 | Zm00001e023821 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e025161_P001 | Zm00001e025161 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030336_P001 | Zm00001e030336 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004097 | catechol oxidase activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |