Solyc05g050520.4.1 (Solyc05g050520)


Aliases : Solyc05g050520

Description : no hits & (original description: none)


Gene families : OG0000798 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000798_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g050520.4.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT5G16330 No alias NC domain-containing protein-related 0.03 OrthoFinder output from all 47 species
Aspi01Gene32601.t1 Aspi01Gene32601 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G038800.1 Ceric.37G038800 not classified & original description: pacid=50615624... 0.05 OrthoFinder output from all 47 species
Dcu_g06749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g41500.1 LOC_Os11g41500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g03369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007053 LRAT_dom 51 197
No external refs found!