Solyc05g041170.3.1 (Solyc05g041170)


Aliases : Solyc05g041170

Description : component MED20 of head module of MEDIATOR transcription co-activator complex


Gene families : OG0004094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g041170.3.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Solyc10g054980.3.1 Solyc10g054980 component MED20 of head module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA Interproscan
BP GO:0006357 regulation of transcription by RNA polymerase II IEA Interproscan
CC GO:0016592 mediator complex IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
InterPro domains Description Start Stop
IPR013921 Mediator_Med20 1 203
No external refs found!