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  5. Solyc05g032850.3.1

Solyc05g032850.3.1 (ECT5, Solyc05g032850)


Aliases : ECT5, Solyc05g032850

Description : methylation reader (ECT)


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g032850.3.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Adi_g010480 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061120 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114839 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02554 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47637 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06040 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15954 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18337 ECT5 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g11511 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04656.t2 Aspi01Gene04656 solute transporter *(TPPT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08484.t1 ECT5, Aspi01Gene08484 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27732.t2 ECT5, Aspi01Gene27732 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0524.g075300 ECT7 methylation reader *(ECT) & original description: CDS=161-2245 0.02 OrthoFinder output from all 47 species
Cba_g38037 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G102000.1 ECT5, Ceric.02G102000 methylation reader *(ECT) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g13426 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07084 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02898 ECT5 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g09075 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017649001 ECT7 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033395001 ECT2 No description available 0.04 OrthoFinder output from all 47 species
Len_g55797 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05658 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16648 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
MA_130754g0010 ECT2 methylation reader (ECT) 0.06 OrthoFinder output from all 47 species
Msp_g08099 ECT5 methylation reader *(ECT) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26733 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00634 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19610 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006035 ECT8 methylation reader *(ECT) & original description: CDS=18-1823 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015300 ECT5 methylation reader *(ECT) & original description: CDS=534-3380 0.02 OrthoFinder output from all 47 species
Sam_g35979 No alias methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12619 ECT5 methylation reader *(ECT) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01211 ECT2 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12437 ECT7 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 405 542
No external refs found!