1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g025985.1.1

Solyc05g025985.1.1 (Solyc05g025985)


Aliases : Solyc05g025985

Description : no description available(sp|q29pu2|sau76_arath : 90.9)


Gene families : OG0004174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004174_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g025985.1.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT1G17345 No alias SAUR-like auxin-responsive protein family 0.05 OrthoFinder output from all 47 species
AT3G12955 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
Aop_g19695 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene24252.t1 Aspi01Gene24252 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G048400.1 Ceric.22G048400 not classified & original description: pacid=50613756... 0.04 OrthoFinder output from all 47 species
Dcu_g05988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_37651 No alias no description available(sp|q29pu2|sau76_arath : 82.8) 0.04 OrthoFinder output from all 47 species
Gb_39586 No alias no description available(sp|q9lqi6|sau77_arath : 82.4) 0.03 OrthoFinder output from all 47 species
LOC_Os08g35110.1 LOC_Os08g35110 no description available(sp|q29pu2|sau76_arath : 85.5) 0.05 OrthoFinder output from all 47 species
LOC_Os12g41600.1 LOC_Os12g41600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g06344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_136766g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_245557g0010 No alias no description available(sp|q29pu2|sau76_arath : 81.6) 0.03 OrthoFinder output from all 47 species
Ppi_g14710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo170108 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo79615 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g00232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022194_P001 Zm00001e022194 no description available(sp|q29pu2|sau76_arath : 103.0) 0.03 OrthoFinder output from all 47 species
Zm00001e034247_P001 Zm00001e034247 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 9 92
No external refs found!