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  5. Solyc05g015920.3.1

Solyc05g015920.3.1 (Solyc05g015920)


Aliases : Solyc05g015920

Description : no hits & (original description: none)


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g015920.3.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00074580 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G24300 No alias GYF domain-containing protein 0.05 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g055823 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g086400 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g126313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48838 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49169 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09024 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g37682 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14645 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17703 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70568 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037093 No alias not classified & original description: CDS=389-5539 0.03 OrthoFinder output from all 47 species
Ceric.18G008600.1 Ceric.18G008600 susceptibility factor *(EXA1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G048100.1 Ceric.18G048100 susceptibility factor *(EXA1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G057600.1 Ceric.33G057600 susceptibility factor *(EXA1) & original description:... 0.03 OrthoFinder output from all 47 species
Cre04.g225350 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g14782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05846 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39021 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04464 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15753 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000921001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01009695001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01033051001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os01g69990.1 LOC_Os01g69990 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04295 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07445 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16227 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10117g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425836g0010 No alias susceptibility factor (EXA1) 0.06 OrthoFinder output from all 47 species
Msp_g20541 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54992 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014813 No alias susceptibility factor *(EXA1) & original description:... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024075 No alias susceptibility factor *(EXA1) & original description: CDS=1-5616 0.04 OrthoFinder output from all 47 species
Sam_g11581 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24517 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g29247 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo438556 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo438614 No alias No description available 0.06 OrthoFinder output from all 47 species
Spa_g08452 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55090 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17159 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35687 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e032780_P001 Zm00001e032780 susceptibility factor (EXA1) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 517 558
No external refs found!