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  5. Solyc05g012640.3.1

Solyc05g012640.3.1 (Solyc05g012640)


Aliases : Solyc05g012640

Description : no hits & (original description: none)


Gene families : OG0001399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g012640.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00026800 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ceric.29G017200.1 Ceric.29G017200 not classified & original description: pacid=50625875... 0.05 OrthoFinder output from all 47 species
Ehy_g02880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012173001 No alias No description available 0.05 OrthoFinder output from all 47 species
Ore_g43509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438604 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR008581 DUF863_pln 141 1068
No external refs found!