1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g012370.3.1

Solyc05g012370.3.1 (Solyc05g012370)


Aliases : Solyc05g012370

Description : no hits & (original description: none)


Gene families : OG0003795 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003795_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g012370.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G13820 No alias alpha/beta-Hydrolases superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g20246 No alias hydrolase *(VTE7) involved in tocopherol biosynthesis &... 0.04 OrthoFinder output from all 47 species
Aob_g07745 No alias hydrolase *(VTE7) involved in tocopherol biosynthesis &... 0.03 OrthoFinder output from all 47 species
Ceric.18G069200.1 Ceric.18G069200 hydrolase *(VTE7) involved in tocopherol biosynthesis &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000133.48 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre03.g152800 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01012213001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_12848 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g09924 No alias hydrolase *(VTE7) involved in tocopherol biosynthesis &... 0.05 OrthoFinder output from all 47 species
MA_8239217g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g45105 No alias hydrolase *(VTE7) involved in tocopherol biosynthesis &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 90 325
No external refs found!