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  5. Solyc05g008220.4.1

Solyc05g008220.4.1 (At17.1, Solyc05g008220)


Aliases : At17.1, Solyc05g008220

Description : Uncharacterized protein At1g66480 OS=Arabidopsis thaliana (sp|q6nlc8|y1648_arath : 130.0)


Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g008220.4.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00035620 evm_27.TU.AmTr_v1... Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00227090 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00166320 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00113p00026730 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G64700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT1G66480 No alias plastid movement impaired 2 0.03 OrthoFinder output from all 47 species
AT1G71015 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT4G10910 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.03 OrthoFinder output from all 47 species
AT5G37840 No alias BEST Arabidopsis thaliana protein match is: plastid... 0.04 OrthoFinder output from all 47 species
Aev_g12298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57399.t1 Aspi01Gene57399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G004300.1 Ceric.24G004300 not classified & original description: pacid=50628779... 0.02 OrthoFinder output from all 47 species
Ceric.37G010100.1 Ceric.37G010100 not classified & original description: pacid=50615888... 0.02 OrthoFinder output from all 47 species
Dcu_g09790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011766001 At17.1 Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01027432001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030865001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_24340 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_25912 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_25914 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_33939 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_39534 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_40213 No alias Uncharacterized protein At1g66480 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g14780.1 LOC_Os06g14780 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Lfl_g20898 At17.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436027g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20252g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_208513g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_248791g0010 At17.1 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_356354g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_853405g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_91700g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_953514g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g39267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g009810.1.1 Solyc09g009810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g005020.3.1 Solyc10g005020 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g27790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004161_P002 Zm00001e004161 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015734_P001 Zm00001e015734 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e034082_P002 Zm00001e034082 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e036745_P001 Zm00001e036745 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 178
No external refs found!