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  5. Solyc04g074280.1.1

Solyc04g074280.1.1 (Solyc04g074280)


Aliases : Solyc04g074280

Description : Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica (sp|q65xl5|wtf1_orysj : 178.0)


Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g074280.1.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT4G08940 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.07 OrthoFinder output from all 47 species
Azfi_s0055.g033936 WTF1, AtWTF1 plastidial RNA basal splicing factor *(WTF1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01485 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031655001 emb1692 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os09g29760.1 LOC_Os09g29760 Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os11g34160.1 LOC_Os11g34160 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ppi_g10310 WTF1, AtWTF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07349 WTF1, AtWTF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000591_P002 Zm00001e000591 Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 77 397
No external refs found!