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  5. Solyc04g064880.4.1

Solyc04g064880.4.1 (Solyc04g064880)


Aliases : Solyc04g064880

Description : Pathogen-related protein OS=Hordeum vulgare (sp|p16273|prpx_horvu : 234.0)


Gene families : OG0003453 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g064880.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00098340 evm_27.TU.AmTr_v1... Pathogen-related protein OS=Hordeum vulgare 0.05 OrthoFinder output from all 47 species
Aev_g09382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49485.t1 Aspi01Gene49485 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G072100.1 Ceric.34G072100 not classified & original description: pacid=50622990... 0.02 OrthoFinder output from all 47 species
GSVIVT01010044001 No alias Pathogen-related protein OS=Hordeum vulgare 0.03 OrthoFinder output from all 47 species
GSVIVT01010045001 No alias Pathogen-related protein OS=Hordeum vulgare 0.06 OrthoFinder output from all 47 species
GSVIVT01010047001 No alias Pathogen-related protein OS=Hordeum vulgare 0.09 OrthoFinder output from all 47 species
GSVIVT01014184001 No alias Pathogen-related protein OS=Hordeum vulgare 0.04 OrthoFinder output from all 47 species
LOC_Os01g14590.1 LOC_Os01g14590 Pathogen-related protein OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
LOC_Os01g53090.1 LOC_Os01g53090 Pathogen-related protein OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
MA_10182631g0010 No alias Pathogen-related protein OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Msp_g04983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018917 No alias not classified & original description: CDS=271-1122 0.03 OrthoFinder output from all 47 species
Sam_g08253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125190 No alias Pathogen-related protein OS=Hordeum vulgare 0.02 OrthoFinder output from all 47 species
Smo228781 No alias Pathogen-related protein OS=Hordeum vulgare 0.02 OrthoFinder output from all 47 species
Solyc04g064870.3.1 Solyc04g064870 Pathogen-related protein OS=Hordeum vulgare... 0.06 OrthoFinder output from all 47 species
Solyc12g014310.2.1 Solyc12g014310 Pathogen-related protein OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Zm00001e017214_P001 Zm00001e017214 Pathogen-related protein OS=Hordeum vulgare... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!