Solyc04g056590.3.1 (Solyc04g056590)


Aliases : Solyc04g056590

Description : pepsin-type protease


Gene families : OG0001117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001117_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g056590.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g043121 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107655 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16688 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02550 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35715.t1 Aspi01Gene35715 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.24G041800.1 Ceric.24G041800 A1-class (Pepsin) protease & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g07618 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21435 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16071 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24609 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06221 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g058400.4.1 Solyc03g058400 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Solyc11g066620.2.1 Solyc11g066620 pepsin-type protease 0.04 OrthoFinder output from all 47 species
Zm00001e022543_P004 Zm00001e022543 pepsin-type protease 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032861 TAXi_N 76 259
IPR032799 TAXi_C 278 430
No external refs found!