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  5. Solyc04g056440.3.1

Solyc04g056440.3.1 (Solyc04g056440)


Aliases : Solyc04g056440

Description : no hits & (original description: none)


Gene families : OG0002694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g056440.3.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00185740 evm_27.TU.AmTr_v1... Probable (S)-tetrahydroprotoberberine... 0.03 OrthoFinder output from all 47 species
AT3G23460 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.06 OrthoFinder output from all 47 species
AT3G23470 No alias Cyclopropane-fatty-acyl-phospholipid synthase 0.04 OrthoFinder output from all 47 species
AT3G23510 No alias Cyclopropane-fatty-acyl-phospholipid synthase 0.04 OrthoFinder output from all 47 species
Ala_g02482 No alias cyclopropane fatty acid synthase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03143 No alias cyclopropane fatty acid synthase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01027886001 No alias Probable (S)-tetrahydroprotoberberine... 0.06 OrthoFinder output from all 47 species
LOC_Os12g16640.1 MEE61, PPO2,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10426263g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10430341g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_719785g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g05280.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g07141 No alias cyclopropane fatty acid synthase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g045150.1.1 Solyc03g045150 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc09g090510.3.1 Solyc09g090510 Probable (S)-tetrahydroprotoberberine... 0.02 OrthoFinder output from all 47 species
Tin_g07933 No alias cyclopropane fatty acid synthase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004177_P002 Zm00001e004177 Pavine N-methyltransferase OS=Thalictrum flavum subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e010128_P001 Zm00001e010128 Probable (S)-tetrahydroprotoberberine... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!