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  5. Solyc04g054480.3.1

Solyc04g054480.3.1 (CSI1, Solyc04g054480)


Aliases : CSI1, Solyc04g054480

Description : CSI-type cellulose synthase CSC-interactive protein


Gene families : OG0001114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g054480.3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Adi_g087253 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aev_g17947 CSI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18895 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Ala_g02729 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Ala_g05148 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Ala_g22294 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Als_g15837 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Als_g23027 CSI1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g23029 CSI1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g29332 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g52429 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Als_g63688 CSI1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g24612 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Aop_g13572 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Aop_g27465 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.08 OrthoFinder output from all 47 species
Aop_g70913 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene13132.t1 CSI1, Aspi01Gene13132 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22318.t1 CSI1, Aspi01Gene22318 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Ceric.34G069600.1 CSI1, Ceric.34G069600 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Dac_g08208 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Dac_g10736 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Dcu_g14963 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Dcu_g49114 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Dde_g08416 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Ehy_g07970 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Ehy_g17146 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008840001 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01022187001 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
LOC_Os03g19462.1 CSI1, LOC_Os03g19462 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
LOC_Os06g11990.1 CSI1, LOC_Os06g11990 CSI-type cellulose synthase CSC-interactive protein 0.11 OrthoFinder output from all 47 species
LOC_Os11g08090.1 LOC_Os11g08090 CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Len_g09031 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Len_g11450 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Lfl_g18951 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Lfl_g27979 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
MA_10435637g0020 CSI1 CSI-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
MA_160330g0010 No alias Protein CELLULOSE SYNTHASE INTERACTIVE 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_6106155g0010 CSI1 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp5g20900.1 CSI1 CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Msp_g15084 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Msp_g26396 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Msp_g43695 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.07 OrthoFinder output from all 47 species
Nbi_g07599 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Nbi_g16604 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Nbi_g18059 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.08 OrthoFinder output from all 47 species
Ore_g41278 CSI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12256 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Pir_g13638 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Pir_g27649 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Ppi_g49434 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021360 No alias cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Sam_g18051 No alias cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Smo78846 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.07 OrthoFinder output from all 47 species
Spa_g10503 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Spa_g12362 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Spa_g26858 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Tin_g04197 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Zm00001e030842_P001 CSI1, Zm00001e030842 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Zm00001e036124_P001 CSI1, Zm00001e036124 CSI-type cellulose synthase CSC-interactive protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 1649 1741
IPR000225 Armadillo 89 119
No external refs found!