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  5. Solyc04g051540.3.1

Solyc04g051540.3.1 (ATWRKY13, WRKY13,...)


Aliases : ATWRKY13, WRKY13, Solyc04g051540

Description : transcription factor (WRKY)


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g051540.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00164440 AtWRKY20,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00116260 AtWRKY20,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00156p00038330 WRKY9, ATWRKY9,... RNA biosynthesis.transcriptional activation.WRKY... 0.06 OrthoFinder output from all 47 species
AT1G55600 ATWRKY10, MINI3, WRKY10 WRKY DNA-binding protein 10 0.03 OrthoFinder output from all 47 species
AT2G03340 WRKY3 WRKY DNA-binding protein 3 0.04 OrthoFinder output from all 47 species
AT2G44745 No alias WRKY family transcription factor 0.05 OrthoFinder output from all 47 species
AT4G39410 ATWRKY13, WRKY13 WRKY DNA-binding protein 13 0.06 OrthoFinder output from all 47 species
AT5G07100 WRKY26 WRKY DNA-binding protein 26 0.02 OrthoFinder output from all 47 species
Adi_g021792 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27561 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33662 WRKY26 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05373 WRKY4 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19921 WRKY75, ATWRKY75 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06724.t1 ATWRKY58,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15984.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31451.t2 ATWRKY24,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52797.t3 Aspi01Gene52797 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66845.t1 WRKY42,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0052.g031586 WRKY75, ATWRKY75 WRKY-type transcription factor & original description: CDS=1-864 0.04 OrthoFinder output from all 47 species
Azfi_s0505.g073943 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: CDS=1-474 0.04 OrthoFinder output from all 47 species
Cba_g02867 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67876 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G052100.1 WRKY42,... WRKY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g29177 WRKY26 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012196001 ATWRKY57, WRKY57 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01018300001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01020864001 WRKY28, ATWRKY28 RNA biosynthesis.transcriptional activation.WRKY... 0.06 OrthoFinder output from all 47 species
GSVIVT01022259001 ATWRKY13, WRKY13 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
GSVIVT01030174001 WRKY54, ATWRKY54 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01034148001 WRKY49, ATWRKY49 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
Gb_26894 No alias transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_31953 WRKY4 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
LOC_Os04g46060.1 LOC_Os04g46060 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os05g40070.1 ATWRKY64,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Lfl_g24750 AtWRKY41, WRKY41 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_17107g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6790522g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Mp6g16800.1 WRKY48, ATWRKY48 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Mp8g10640.1 WRKY4 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Msp_g06292 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15358 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29204 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06217 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03208 WRKY3 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08423 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29855 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003023 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: CDS=1-1497 0.05 OrthoFinder output from all 47 species
Sam_g40618 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g058540.3.1 WRKY48,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc01g089960.3.1 Solyc01g089960 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e007834_P002 WRKY2, ATWRKY2,... transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
Zm00001e016669_P001 ATWRKY13,... transcription factor (WRKY) 0.06 OrthoFinder output from all 47 species
Zm00001e018502_P001 WRKY49,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 158 214
No external refs found!