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  5. Solyc04g040120.1.1

Solyc04g040120.1.1 (FAD2, Solyc04g040120)


Aliases : FAD2, Solyc04g040120

Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0001837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g040120.1.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Aev_g02163 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26118 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01025364001 FAD2 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
LOC_Os07g23410.1 FAD2, LOC_Os07g23410 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Ore_g25234 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ore_g31852 FAD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016352 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Solyc03g058430.3.1 FAD2, Solyc03g058430 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc04g040130.1.1 FAD2, Solyc04g040130 omega-3/omega-6 fatty acid desaturase 0.06 OrthoFinder output from all 47 species
Solyc12g045035.1.1 FAD2, Solyc12g045035 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc12g049030.1.1 FAD2, Solyc12g049030 omega-3/omega-6 fatty acid desaturase 0.07 OrthoFinder output from all 47 species
Solyc12g100250.3.1 FAD2, Solyc12g100250 omega-3/omega-6 fatty acid desaturase 0.07 OrthoFinder output from all 47 species
Zm00001e023386_P002 FAD2, Zm00001e023386 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Zm00001e039637_P001 FAD2, Zm00001e039637 omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Zm00001e042261_P001 FAD2, Zm00001e042261 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR021863 FAS_N 20 58
IPR005804 FA_desaturase_dom 77 336
No external refs found!