Solyc04g040090.4.1 (Solyc04g040090)


Aliases : Solyc04g040090

Description : Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis thaliana (sp|q4v3d9|ssl10_arath : 218.0) & Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase(50.4.3 : 160.0)


Gene families : OG0000347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g040090.4.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00110150 LAP3,... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00021810 SSL3,... Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase 0.03 OrthoFinder output from all 47 species
AT3G57010 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g03359 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50950 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22680 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30717 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69950 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11208.t1 SSL3, Aspi01Gene11208 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45098.t1 Aspi01Gene45098 EC_4.3 carbon-nitrogen lyase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene48272.t2 Aspi01Gene48272 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60817.t1 SSL3, Aspi01Gene60817 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63166.t1 Aspi01Gene63166 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024742 No alias EC_4.3 carbon-nitrogen lyase & original description: CDS=95-1279 0.04 OrthoFinder output from all 47 species
Ceric.09G008600.1 LAP3, Ceric.09G008600 EC_4.3 carbon-nitrogen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g20885 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00980 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02502 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10876 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16489 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026127001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01034449001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.05 OrthoFinder output from all 47 species
GSVIVT01034671001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
LOC_Os06g35950.1 LOC_Os06g35950 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
LOC_Os07g35970.1 LOC_Os07g35970 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g20684.1 LOC_Os09g20684 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.06 OrthoFinder output from all 47 species
LOC_Os09g20700.1 LOC_Os09g20700 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 OrthoFinder output from all 47 species
LOC_Os09g20810.1 LOC_Os09g20810 Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.07 OrthoFinder output from all 47 species
Len_g01772 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429962g0010 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_106610g0010 LAP3 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_18398g0020 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_7160065g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp4g19000.1 SSL3 Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g13231 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00503 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09839 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18224 LAP3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16462 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo231921 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc03g053130.3.1 LAP3, Solyc03g053130 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g07539 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02543 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03220 SSL3 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028742_P001 Zm00001e028742 Protein STRICTOSIDINE SYNTHASE-LIKE 10 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!